Protein ZmTUB1
ZmTUB1 is a protein in the TUB family.
Information
TF Name: ZmTUB1
Species: Maize
TF Family: TUB
Gene Name(Synonym): TUBTF1
Uniprot ID: B4FG04

Protein ZmTUB1

ZmTUB1 is a protein in the TUB family.

Overview of domains present in v5 transcripts
PF01167
Zm00001eb360160_T003
Zm00001eb360160_T001
Zm00001eb360160_T002
Zm00001eb360160_T004

Protein-DNA Interactions

Meme Logos for Maize v4 Gene IDs


Gene IDTypeMEME LogoSequenceFIMOPosition
Zm00001d011578DAPseq no logo sequence fimo position
Zm00001d011578DAPseq no logo sequence fimo position
Zm00001d011578ChIPseq no logo sequence fimo position
Zm00001d011578PChIPseq no logo sequence fimo position

Interactions where ZmTUB1 is the regulator


There are no protein-dna interactions that fit this criteria.

Interactions where ZmTUB1 is the target  
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There are 80 protein-dna interactions that fit this criteria. download excel sheet

Zm00001eb360160_T003 from maize genome v5

Amino Acid Sequence
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MPRDGAQAAPPPERGEMDEVVEADPDTEAEDQEERWARLLPELLSDVVRRVEASGGERWPARKDVVSCACVCRRWREAAV
SVVRPPAESGKITFPSSLKQPGPRERPMQCFIKRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAED
LSQGSNAYMGKLRSDFWGTNFKIYDSKPPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKSRGPRRMYC
TLECPSAQETWENSLKTKFRRPLGPTTLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAADPSEPTTNVDDETVLL
QFGKVDSDMFTMDYRQPLSAFQAFAISLSSFGTKLACE

MPRDGAQAAPPPERGEMDEVVEADPDTEAEDQEERWARLLPELLSDVVRRVEASGGERWPARKDVVSCACVCRRWREAAV
SVVRPPAESGKITFPSSLKQPGPRERPMQCFIKRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAED
LSQGSNAYMGKLRSDFWGTNFKIYDSKPPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKSRGPRRMYC
TLECPSAQETWENSLKTKFRRPLGPTTLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAADPSEPTTNVDDETVLL
QFGKVDSDMFTMDYRQPLSAFQAFAISLSSFGTKLACE

MPRDGAQAAPPPERGEMDEVVEADPDTEAEDQEERWARLLPELLSDVVRRVEASGGERWPARKDVVSCACVCRRWREAAV
SVVRPPAESGKITFPSSLKQPGPRERPMQCFIKRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAED
LSQGSNAYMGKLRSDFWGTNFKIYDSKPPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKSRGPRRMYC
TLECPSAQETWENSLKTKFRRPLGPTTLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAADPSEPTTNVDDETVLL
QFGKVDSDMFTMDYRQPLSAFQAFAISLSSFGTKLACE

MPRDGAQAAPPPERGEMDEVVEADPDTEAEDQEERWARLLPELLSDVVRRVEASGGERWPARKDVVSCACVCRRWREAAV
SVVRPPAESGKITFPSSLKQPGPRERPMQCFIKRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAED
LSQGSNAYMGKLRSDFWGTNFKIYDSKPPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKSRGPRRMYC
TLECPSAQETWENSLKTKFRRPLGPTTLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAADPSEPTTNVDDETVLL
QFGKVDSDMFTMDYRQPLSAFQAFAISLSSFGTKLACE

MPRDGAQAAPPPERGEMDEVVEADPDTEAEDQEERWARLLPELLSDVVRRVEASGGERWPARKDVVSCACVCRRWREAAV
SVVRPPAESGKITFPSSLKQPGPRERPMQCFIKRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAED
LSQGSNAYMGKLRSDFWGTNFKIYDSKPPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKSRGPRRMYC
TLECPSAQETWENSLKTKFRRPLGPTTLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAADPSEPTTNVDDETVLL
QFGKVDSDMFTMDYRQPLSAFQAFAISLSSFGTKLACE

Secondary Structure Color Code
BEND region with high backbone curvature without specific hydrogen bonding
HELX_LH_PP_P left-handed polyproline helix
HELX_RH_3T_P right-handed 3-10 helix
HELX_RH_AL_P right-handed alpha helix
HELX_RH_PI_P right-handed pi helix
STRN beta strand
TURN_TY1_P type I turn
UNDETERMINED no data available
Domains Present
PF01167
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Nucleotide Sequence
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AGTTCCGCGGTTTTGAGTAAACAAG...

GRMZM2G068586_T01 from maize genome v3


Related TFome: pUT1397

Amino Acid Sequence
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MPRDGAQAAPPPERGEMDEVVEADPDTEAEDQEERWARLLPELLSDVVRRVEASGGERWPARKDVVSCACVCRRWREAAV
SVVRPPAESGKITFPSSLKQPGPRERPMQCFIKRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAED
LSQGSNAYMGKLRSDFWGTNFKIYDSKPPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKSRGPRRMYC
TLECPSAQETWENSLKTKFRRPLGPTTLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAADPSEPTTNVDDETVLL
QFGKVDSDMFTMDYRQPLSAFQAFAISLSSFGTKLACE

Nucleotide Sequence
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CGGTTTTGAGTAAACAAGCGAGCGA...

GRMZM2G068586_T02 from maize genome v3

Amino Acid Sequence
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MQCFIKRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAEDLSQGSNAYMGKLRSDFWGTNFKIYDSK
PPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKSRGPRRMYCTLECPSAQETWENSLKTKFRRPLGPTT
LRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAADPSEPTTNVDDETVLLQFGKVDSDMFTMDYRQPLSAFQAFAIS
LSSFGTKLACE

Nucleotide Sequence
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AGTTCCGCGGTTTTGAGTAAACAAG...

GRMZM2G068586_T03 from maize genome v3

Amino Acid Sequence
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MPRDGAQAAPPPERGEMDEVVEADPDTEAEDQEERWARLLPELLSDVVRRVEASGGERWPARKDVVSCACVCRRWREAAV
SVVRPPAESGKITFPSSLKQPGPRERPMQCFIKRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAED
LSQGSNAYMGKLRSDFWGTNFKIYDSKPPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKSRGPRRMYC
TLECPSAQETWENSLKTKFRRPLGPTTLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAADPSEPTTNVDDETVLL
QFGKVDSDMFTMDYRQPLSAFQAFAISLSSFGTKLACE

Nucleotide Sequence
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CGGTTTTGAGTAAACAAGCGAGCGA...

GRMZM2G068586_T04 from maize genome v3

Amino Acid Sequence
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MPRDGAQAAPPPERGEMDEVVEADPDTEAEDQEERWARLLPELLSDVVRRVEASGGERWPARKDVVSCACVCRRWREAAV
SVVRPPAESGKITFPSSLKQPGPRERPMQCFIKRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAED
LSQGSNAYMGKLR

Nucleotide Sequence
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CGGTTTTGAGTAAACAAGCGAGCGA...

Zm00001d011578_T001 from maize genome v4

Amino Acid Sequence
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MYCTLECPSAQETWENSLKTKFRRPLGPTTLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAADPSEPTTNVDDET
VLLQFGKVDSDMFTMDYRQPLSAFQAFAISLSSFGTKLACE

Nucleotide Sequence
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TCGAATTGCTGACCTCACGATTTTG...

Zm00001d011578_T002 from maize genome v4

Amino Acid Sequence
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MQCFIKRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAEDLSQGSNAYMGKLRSDFWGTNFKIYDSK
PPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKSRGPRRMYCTLECPSAQETWENSLKTKFRRPLGPTT
LRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAADPSEPTTNVDDETVLLQFGKVDSDMFTMDYRQPLSAFQAFAIS
LSSFGTKLACE

Nucleotide Sequence
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CCGCGACTGTAGTGGGATTGTGGGA...

Zm00001d011578_T003 from maize genome v4

Amino Acid Sequence
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MPRDGAQAAPPPERGEMDEVVEADPDTEAEDQEERWARLLPELLSDVVRRVEASGGERWPARKDVVSCACVCRRWREAAV
SVVRPPAESGKITFPSSLKQPGPRERPMQCFIKRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAED
LSQGSNAYMGKLRSDFWGTNFKIYDSKPPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKSRGPRRMYC
TLECPSAQETWENSLKTKFRRPLGPTTLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAADPSEPTTNVDDETVLL
QFGKVDSDMFTMDYRQPLSAFQAFAISLSSFGTKLACE

Nucleotide Sequence
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CGCGGTTTTGAGTAAACAAGCGAGC...

Zm00001d011578_T005 from maize genome v4

Amino Acid Sequence
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MCAAALVCVYPCDRVVSIILRRDRCSMRFWSLLTKLDHAVSIILRRDRCNMGFWSLLTKLP

Nucleotide Sequence
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AAGCGAGCGAAAAAATAAGAAGAGA...

Zm00001d011578_T006 from maize genome v4

Amino Acid Sequence
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MPRDGAQAAPPPERGEMDEVVEADPDTEAEDQEERWARLLPELLSDVVRRVEASGGERWPARKDVVSCACVCRRWREAAV
SVVRPPAESGKITFPSSLKQPGPRERPMQCFIKRNKNNSTFYLYLGFTS

Nucleotide Sequence
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CGCGGTTTTGAGTAAACAAGCGAGC...

Zm00001d011578_T007 from maize genome v4

Amino Acid Sequence
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MPRDGAQAAPPPERGEMDEVVEADPDTEAEDQEERWARLLPELLSDVVRRVEASGGERWPARKDVVSCACVCRRWREAAV
SVVRPPAESGKITFPSSLKQPGPRERPMQCFIKRNKNNSTFYLYLGFTSCK

Nucleotide Sequence
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CGCGGTTTTGAGTAAACAAGCGAGC...

Zm00001d011578_T008 from maize genome v4

Amino Acid Sequence
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MQCFIKRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAEDLSQGSNAYMGKLRSDFWGTNFKIYDSK
PPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKSRGPRRMYCTLECPSAQETWENSLKTKFRRPLGPTT
LRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAADPSEPTTNVDDETVLLQFGKVDSDMFTMDYRQPLSAFQAFAIS
LSSFGTKLACE

Nucleotide Sequence
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GTAAACAAGCGAGCGAAAAAATAAG...

Zm00001d011578_T009 from maize genome v4

Amino Acid Sequence
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MQCFIKRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAEDLSQGSNAYMGKLRSDFWGTNFKIYDSK
PPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKSRGPRRMYCTLECPSAQETWENSLKTKFRRPLGPTT
LRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAADPSEPTTNVDDETVLLQFGKVDSDMFTMDYRQPLSAFQAFAIS
LSSFGTKLACE

Nucleotide Sequence
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GACTGTAGTGGGATTGTGGGAAGAT...

Zm00001eb360160_T001 from maize genome v5

Amino Acid Sequence
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MPRDGAQAAPPPERGEMDEVVEADPDTEAEDQEERWARLLPELLSDVVRRVEASGGERWPARKDVVSCACVCRRWREAAV
SVVRPPAESGKITFPSSLKQPGPRERPMQCFIKRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAED
LSQGSNAYMGKLRSDFWGTNFKIYDSKPPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKSRGPRRMYC
TLECPSAQETWENSLKTKFRRPLGPTTLRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAADPSEPTTNVDDETVLL
QFGKVDSDMFTMDYRQPLSAFQAFAISLSSFGTKLACE

Nucleotide Sequence
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CAGCCTACAGTTCCGCGGTTTTGAG...

Zm00001eb360160_T002 from maize genome v5

Amino Acid Sequence
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MQCFIKRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAEDLSQGSNAYMGKLRSDFWGTNFKIYDSK
PPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKSRGPRRMYCTLECPSAQETWENSLKTKFRRPLGPTT
LRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAADPSEPTTNVDDETVLLQFGKVDSDMFTMDYRQPLSAFQAFAIS
LSSFGTKLACE

Nucleotide Sequence
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CAGCCTACAGTTCCGCGGTTTTGAG...

Zm00001eb360160_T004 from maize genome v5

Amino Acid Sequence
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MQCFIKRNKNNSTFYLYLGFTSSPVDKGKFLMAARRFRRGPHTEYIISLDAEDLSQGSNAYMGKLRSDFWGTNFKIYDSK
PPYDGAKASSSRSSRRFGSRRISPQVSAGNYEVGQVSYKYNLLKSRGPRRMYCTLECPSAQETWENSLKTKFRRPLGPTT
LRNKAPRWHEHLQCWCLNFHGRVTVASVKNFQLVAAADPSEPTTNVDDETVLLQFGKVDSDMFTMDYRQPLSAFQAFAIS
LSSFGTKLACE

Nucleotide Sequence
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AGTTCCGCGGTTTTGAGTAAACAAG...


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